Team

1.

Journal Article

Catalán, A.; Merondun, J.; Knief, U.; Wolf, J. B. W.: Epigenetic mechanisms of partial dosage compensation in an avian, female heterogametic system. bioRxiv: the preprint server for biology (2025)

MPG.PuRe

DOI

2.

Journal Article

Tusso, S.; Suo, F.; Liang, Y.; Du, L.-L.; Wolf, J. B. W.: Reactivation of transposable elements following hybridization in fission yeast. Genome Research 32, pp. 324 - 336 (2022)

MPG.PuRe

DOI

3.

Journal Article

Dussex, N.; Kutschera, V. E.; Wiberg, R. A. W.; Parker, D. J.; Hunt, G. R.; Gray, R. D.; Rutherford, K.; Abe, H.; Fleischer, R. C.; Ritchie, M. G. et al.; Rutz, C.; Wolf, J. B. W.; Gemmell, N. J.: A genome-wide investigation of adaptive signatures in protein-coding genes related to tool behaviour in New Caledonian and Hawaiian crows. Molecular Ecology 30 (4), 15775, pp. 973 - 986 (2021)

MPG.PuRe

DOI

4.

Journal Article

Foote, A. D.; Hooper, R.; Alexander, A.; Baird, R. W.; Baker, C. S.; Ballance, L.; Barlow, J.; Brownlow, A.; Collins, T.; Constantine, R. et al.; Dalla Rosa, L.; Davison, N. J.; Durban, J. W.; Esteban, R.; Excoffier, L.; Martin, S. L. F.; Forney, K. A.; Gerrodette, T.; Gilbert, M. T. P.; Guinet, C.; Hanson, M. B.; Li, S. H.; Martin, M. D.; Robertson, K. M.; Samarra, F. I. P.; de Stephanis, R.; Tavares, S. B.; Tixier, P.; Totterdell, J. A.; Wade, P.; Wolf, J. B. W.; Fan, G. Y.; Zhang, Y. L.; Morin, P. A.: Runs of homozygosity in killer whale genomes provide a global record of demographic histories. Molecular Ecology 30 (23), pp. 6162 - 6177 (2021)

MPG.PuRe

DOI

5.

Journal Article

Knief, U.; Forstmeier, W.; Kempenaers, B.; Wolf, J. B. W.: A sex chromosome inversion is associated with copy number variation of mitochondrial DNA in zebra finch sperm. Royal Society Open Science 8 (9), 211025 (2021)

MPG.PuRe

DOI

6.

Journal Article

Lopes, F.; Oliveira, L. R.; Kessler, A.; Beux, Y.; Crespo, E.; Cardenas-Alayza, S.; Majluf, P.; Sepulveda, M.; Brownell, R. L.; Franco-Trecu, V. et al.; Paez-Rosas, D.; Chaves, J.; Loch, C.; Robertson, B. C.; Acevedo-Whitehouse, K.; Elorriaga-Verplancken, F. R.; Kirkman, S. P.; Peart, C. R.; Wolf, J. B. W.; Bonatto, S. L.: Phylogenomic discordance in the eared seals is best explained by incomplete lineage sorting following explosive radiation in the southern hemisphere. Systematic Biology 70 (4), pp. 786 - 802 (2021)

MPG.PuRe

DOI

7.

Journal Article

Metzler, D.; Knief, U.; Penalba, J. V.; Wolf, J. B. W.: Assortative mating and epistatic mating-trait architecture induce complex movement of the crow hybrid zone. Evolution: International journal of organic evolution 75 (12), pp. 3154 - 3174 (2021)

MPG.PuRe

DOI

8.

Journal Article

Peart, C. R.; Williams, C.; Pophaly, S. D.; Neely, B. A.; Gulland, F. M. D.; Adams, D. J.; Ng, B. L.; Cheng, W.; Goebel, M. E.; Fedrigo, O. et al.; Haase, B.; Mountcastle, J.; Fungtammasan, A.; Formenti, G.; Collins, J.; Wood, J.; Sims, Y.; Torrance, J.; Tracey, A.; Howe, K.; Rhie, A.; Hoffman, J. I.; Johnson, J.; Jarvis, E. D.; Breen, M.; Wolf, J. B. W.: Hi-C scaffolded short- and long-read genome assemblies of the California sea lion are broadly consistent for syntenic inference across 45 million years of evolution. Molecular Ecology Resources 21 (7), pp. 2455 - 2470 (2021)

MPG.PuRe

DOI

9.

Journal Article

Schielzeth, H.; Wolf, J. B. W.: Community genomics: A community-wide perspective on within-species genetic diversity. American Journal of Botany 108 (11), pp. 2108 - 2111 (2021)

MPG.PuRe

DOI

10.

Journal Article

Tusso, S.; Nieuwenhuis, B. P. S.; Weissensteiner, B.; Immler, S.; Wolf, J. B. W.: Experimental evolution of adaptive divergence under varying degrees of gene flow. Nature Ecology & Evolution 5 (3), pp. 338 - 349 (2021)

MPG.PuRe

DOI

11.

Journal Article

Knief, U.; Bossu, C. M.; Wolf, J. B. W.: Extra-pair paternity as a strategy to reduce the costs of heterospecific reproduction? Insights from the crow hybrid zone. Journal of Evolutionary Biology 33 (5), pp. 727 - 733 (2020)

MPG.PuRe

DOI

12.

Journal Article

Knief, U.; Forstmeier, W.; Pei, Y.; Wolf, J. B. W.; Kempenaers, B.: A test for meiotic drive in hybrids between Australian and Timor zebra finches. Ecology and Evolution 10 (23), pp. 13464 - 13475 (2020)

MPG.PuRe

DOI

13.

Journal Article

Kutschera, V. E.; Poelstra, J. W.; Botero-Castro, F.; Dussex, N.; Gennnnell, N. J.; Hunt, G. R.; Ritchie, M. G.; Rutz, C.; Wiberg, R. A. W.; Wolf, J. B. W.: Purifying selection in corvids is less efficient on islands. Molecular Biology and Evolution 37 (2), pp. 469 - 474 (2020)

MPG.PuRe

DOI

14.

Journal Article

Mugal, C. F.; Kutschera, V. E.; Botero-Castro, F.; Wolf, J. B. W.; Kaj, I.: Polymorphism data assist estimation of the nonsynonymous over synonymous fixation rate ratio omega for closely related species. Molecular Biology and Evolution 37 (1), pp. 260 - 279 (2020)

MPG.PuRe

DOI

15.

Journal Article

Paris, M.; Boyer, R.; Jaenichen, R.; Wolf, J. B. W.; Karageorgi, M.; Green, J.; Cagnon, M.; Parinello, H.; Estoup, A.; Gautier, M. et al.; Gompel, N.; Prud’homme, B.: Near‑chromosome level genome assembly of the fruit pest Drosophila suzukii using long‑read sequencing. Scientific Reports 10, 11227 (2020)

MPG.PuRe

DOI

16.

Journal Article

Peart, C. R.; Tusso, S.; Pophaly, S. D.; Botero-Castro, F.; Wu, C. C.; Aurioles-Gamboa, D.; Baird, A. B.; Bickham, J. W.; Forcada, J.; Galimberti, F. et al.; Gemmell, N. J.; Hoffman, J. I.; Kovacs, K. M.; Kunnasranta, M.; Lydersen, C.; Nyman, T.; de Oliveira, L. R.; Orr, A. J.; Sanvito, S.; Valtonen, M.; Shafer, A. B. A.; Wolf, J. B. W.: Determinants of genetic variation across eco-evolutionary scales in pinnipeds. Nature Ecology & Evolution 4 (8), pp. 1095 - 1104 (2020)

MPG.PuRe

DOI

17.

Journal Article

Penalba, J. V.; Wolf, J. B. W.: From molecules to populations: Appreciating and estimating recombination rate variation. Nature Reviews Genetics 21 (8), pp. 476 - 492 (2020)

MPG.PuRe

DOI

18.

Journal Article

Weissensteiner, M. H.; Bunikis, I.; Catalan, A.; Francoijs, K. J.; Knief, U.; Heim, W.; Peona, V.; Pophaly, S. D.; Sedlazeck, F. J.; Suh, A. et al.; Warmuth, V. M.; Wolf, J. B. W.: Discovery and population genomics of structural variation in a songbird genus. Nature Communications 11, 3403 (2020)

MPG.PuRe

DOI

19.

Journal Article

Eisenhauer, N.; Bonkowski, M.; Brose, U.; Buscot, F.; Durka, W.; Ebeling, A.; Fischer, M.; Gleixner, G.; Heintz-Buschart, A.; Hines, J. et al.; Jesch, A.; Lange, M.; Meyer, S.; Roscher, C.; Scheu, S.; Schielzeth, H.; Schloter, M.; Schulz, S.; Unsicker, S.; van Dam, N. M.; Weigelt, A.; Weisser, W. W.; Wirth, C.; Wolf, J. B. W.; Schmid, B.: Biotic interactions, community assembly, and ecoevolutionary dynamics as drivers of long-term biodiversity–ecosystem functioning relationships. Research Ideas and Outcomes 5, e47042 (2019)

MPG.PuRe

DOI

20.

Journal Article

Foote, A. D.; Martin, M. D.; Louis, M.; Pacheco, G.; Robertson, K. M.; Sinding, M. H. S.; Amaral, A. R.; Baird, R. W.; Baker, C. S.; Ballance, L. et al.; Barlow, J.; Brownlow, A.; Collins, T.; Constantine, R.; Dabin, W.; Dalla Rosa, L.; Davison, N. J.; Durban, J. W.; Esteban, R.; Ferguson, S. H.; Gerrodette, T.; Guinet, C.; Hanson, M. B.; Hoggard, W.; Matthews, C. J. D.; Samarra, F. I. P.; de Stephanis, R.; Tavares, S. B.; Tixier, P.; Totterdell, J. A.; Wade, P.; Excoffier, L.; Gilbert, M. T. P.; Wolf, J. B. W.; Morin, P. A.: Killer whale genomes reveal a complex history of recurrent admixture and vicariance. Molecular Ecology 28 (14), pp. 3427 - 3444 (2019)

MPG.PuRe

DOI

21.

Journal Article

Grosser, S.; Sauer, J.; Paijmans, A. J.; Caspers, B. A.; Forcada, J.; Wolf, J. B. W.; Hoffman, J. I.: Fur seal microbiota are shaped by the social and physical environment, show mother-offspring similarities and are associated with host genetic quality. Molecular Ecology 28 (9), pp. 2406 - 2422 (2019)

MPG.PuRe

DOI

22.

Journal Article

Holtmann, B.; Buskas, J.; Steele, M.; Solokovskis, K.; Wolf, J. B. W.: Dominance relationships and coalitionary aggression against conspecifics in female carrion crows. Scientific Reports 9, 15922 (2019)

MPG.PuRe

DOI

23.

Journal Article

Hooper, R.; Brealey, J. C.; van der Valk, T.; Alberdi, A.; Durban, J. W.; Fearnbach, H.; Robertson, K. M.; Baird, R. W.; Hanson, M. B.; Wade, P. et al.; Gilbert, M. T. P.; Morin, P. A.; Wolf, J. B. W.; Foote, A. D.; Guschanski, K.: Host-derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin. Molecular Ecology 28 (2), pp. 484 - 502 (2019)

MPG.PuRe

DOI

24.

Journal Article

Knief, U.; Bossu, C. M.; Saino, N.; Hansson, B.; Poelstra, J.; Vijay, N.; Weissensteiner, M.; Wolf, J. B. W.: Epistatic mutations under divergent selection govern phenotypic variation in the crow hybrid zone. Nature Ecology & Evolution 3 (4), pp. 570 - 576 (2019)

MPG.PuRe

DOI

25.

Journal Article

Tao, Y. T.; Suo, F.; Tusso, S.; Wang, Y. K.; Huang, S.; Wolf, J. B. W.; Du, L. L.: Intraspecific diversity of fission yeast mitochondrial genomes. Genome Biology and Evolution 11 (8), pp. 2312 - 2329 (2019)

MPG.PuRe

DOI

26.

Journal Article

Tusso, S.; Nieuwenhuis, B. P. S.; Sedlazeck, F. J.; Davey, J. W.; Jeffares, D. C.; Wolf, J. B. W.: Ancestral admixture is the main determinant of global biodiversity in fission yeast. Molecular Biology and Evolution 36 (9), pp. 1975 - 1989 (2019)

MPG.PuRe

DOI

27.

Journal Article

Wu, C. C.; Klaesson, A.; Buskas, J.; Ranefall, P.; Mirzazadeh, R.; Soderberg, O.; Wolf, J. B. W.: In situ quantification of individual mRNA transcripts in melanocytes discloses gene regulation of relevance to speciation. The Journal of Experimental Biology 222 (5), jeb194431 (2019)

MPG.PuRe

DOI

28.

Journal Article

Humble, E.; Dasmahapatra, K. K.; Martinez-Barrio, A.; Gregorio, I.; Forcada, J.; Polikeit, A. C.; Goldsworthy, S. D.; Goebel, M. E.; Kalinowski, J.; Wolf, J. B. W. et al.; Hoffman, J. I.: RAD sequencing and a hybrid Antarctic fur seal genome assembly reveal rapidly decaying linkage disequilibrium, global population structure and evidence for inbreeding. G3: Genes, Genomes, Genetics 8 (8), pp. 2709 - 2722 (2018)

MPG.PuRe

DOI

29.

Journal Article

Nieuwenhuis, B. P. S.; Tusso, S.; Bjerling, P.; Stangberg, J.; Wolf, J. B. W.; Immler, S.: Repeated evolution of self-compatibility for reproductive assurance. Nature Communications 9, 1639 (2018)

MPG.PuRe

DOI

30.

Journal Article

Stoffel, M. A.; Humble, E.; Paijmans, A. J.; Acevedo-Whitehouse, K.; Chilvers, B. L.; Dickerson, B.; Galimberti, F.; Gemmell, N. J.; Goldsworthy, S. D.; Nichols, H. J. et al.; Krüger, O.; Negro, S.; Osborne, A.; Pastor, T.; Robertson, B.C.; Sanvito, S.; Schultz, J. K.; Shafer, A. B. A.; Wolf, J. B. W.; Hoffman, J. I.: Demographic histories and genetic diversity across pinnipeds are shaped by human exploitation, ecology and life-history. Nature Communications 9, 4836 (2018)

MPG.PuRe

DOI

31.

Journal Article

Dutoit, L.; Vijay, N.; Mugal, C. F.; Bossu, C. M.; Burri, R.; Wolf, J. B. W.; Ellegren, H.: Covariation in levels of nucleotide diversity in homologous regions of the avian genome long after completion of lineage sorting. Proceedings of the Royal Society B: Biological Sciences 284 (1849), 20162756 (2017)

MPG.PuRe

DOI

32.

Journal Article

Ellegren, H.; Wolf, J. B. W.: Parallelism in genomic landscapes of differentiation, conserved genomic features and the role of linked selection. Journal of Evolutionary Biology 30 (8), pp. 1516 - 1518 (2017)

MPG.PuRe

DOI

33.

Journal Article

Nabholz, B.; Wolf, J. B. W.: Colonisation of subterranean ecosystems leads to larger genome in waterlouse (Aselloidea). Peer Community in Evolutionary Biology, 100029 (2017)

MPG.PuRe

DOI

34.

Journal Article

Shafer, A. B. A.; Peart, C. R.; Tusso, S.; Maayan, I.; Brelsford, A.; Wheat, C. W.; Wolf, J. B. W.: Bioinformatic processing of RAD-seq data dramatically impacts downstream population genetic inference. Methods in Ecology and Evolution 8 (8), pp. 907 - 917 (2017)

MPG.PuRe

DOI

35.

Journal Article

Vijay, N.; Weissensteiner, M.; Burri, R.; Kawakami, T.; Ellegren, H.; Wolf, J. B. W.: Genomewide patterns of variation in genetic diversity are shared among populations, species and higher-order taxa. Molecular Ecology 26 (16), pp. 4284 - 4295 (2017)

MPG.PuRe

DOI

36.

Journal Article

Weissensteiner, M. H.; Pang, A. W. C.; Bunikis, I.; Hoijer, I.; Vinnere-Petterson, O.; Suh, A.; Wolf, J. B. W.: Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications. Genome Research 27 (5), pp. 697 - 708 (2017)

MPG.PuRe

DOI

37.

Journal Article

Wolf, J. B. W.; Ellegren, H.: Making sense of genomic islands of differentiation in light of speciation. Nature Reviews Genetics 18 (2), pp. 87 - 100 (2017)

MPG.PuRe

DOI

38.

Journal Article

Foote, A. D.; Vijay, N.; Avila-Arcos, M. C.; Baird, R. W.; Durban, J. W.; Fumagalli, M.; Gibbs, R. A.; Hanson, M. B.; Korneliussen, T. S.; Martin, M. D. et al.; Robertson, K. M.; Sousa, V. C.; Vieira, F. G.; Vinar, T.; Wade, P.; Worley, K. C.; Excoffier, L.; Morin, P. A.; Gilbert, M. T. P.; Wolf, J. B. W.: Genome-culture coevolution promotes rapid divergence of killer whale ecotypes. Nature Communications 7, 11693 (2016)

MPG.PuRe

DOI

39.

Journal Article

Humble, E.; Martinez-Barrio, A.; Forcada, J.; Trathan, P. N.; Thorne, M. A. S.; Hoffmann, M.; Wolf, J. B. W.; Hoffman, J. I.: A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them. Molecular Ecology Resources 16 (4), pp. 909 - 921 (2016)

MPG.PuRe

DOI

40.

Journal Article

Shafer, A. B. A.; Northrup, J. M.; Wikelski, M.; Wittemyer, G.; Wolf, J. B. W.: Forecasting ecological genomics: High-tech animal instrumentation meets high-throughput sequencing. PLoS Biology 14 (1), e1002350 (2016)

MPG.PuRe

DOI

41.

Journal Article

Shafer, A. B. A.; Wolf, J. B. W.; Alves, P. C.; Bergstrom, L.; Colling, G.; Dalen, L.; De Meester, L.; Ekblom, R.; Fior, S.; Hajibabaei, M. et al.; Hoezel, A. R.; Hoglund, J.; Jensen, E. L.; Krutzen, M.; Norman, A. J.; Osterling, E. M.; Ouborg, N. J.; Piccolo, J.; Primmer, C. R.; Reed, F. A.; Roumet, M.; Salmona, J.; Schwartz, M. K.; Segelbacher, G.; Thaulow, J.; Valtonen, M.; Vergeer, P.; Weissensteiner, M.; Wheat, C. W.; Vila, C.; Zielinski, P.: Genomics in conservation: Case studies and bridging the gap between data and application. Reply to Garner et al. Trends in Ecology and Evolution 31 (2), pp. 83 - 84 (2016)

MPG.PuRe

DOI

42.

Journal Article

Trillmich, F.; Meise, K.; Kalberer, S.; Mueller, B.; Piedrahita, P.; Porschmann, U.; Wolf, J. B. W.; Krüger, O.: On the challenge of interpreting census data: Insights from a study of an endangered pinniped. PLoS One 11 (5), e0154588 (2016)

MPG.PuRe

DOI

43.

Journal Article

Vijay, N.; Bossu, C. M.; Poelstra, J. W.; Weissensteiner, M. H.; Suh, A.; Kryukov, A. P.; Wolf, J. B. W.: Evolution of heterogeneous genome differentiation across multiple contact zones in a crow species complex. Nature Communications 7, 13195 (2016)

MPG.PuRe

DOI

44.

Journal Article

von Rönn, J. A. C.; Shafer, A. B. A.; Wolf, J. B. W.: Disruptive selection without genome-wide evolution across a migratory divide. Molecular Ecology 25 (11), pp. 2529 - 2541 (2016)

MPG.PuRe

DOI

45.

Journal Article

Camus, M. F.; Wolf, J. B. W.; Morrow, E. H.; Dowling, D. K.: Single nucleotides in the mtDNA sequence modify Mitochondrial molecular function and are associated with Sex-specific effects on fertility and aging. Current Biology 25 (20), pp. 2717 - 2722 (2015)

MPG.PuRe

DOI

46.

Journal Article

Foote, A. D.; Liu, Y.; Thomas, G. W. C.; Vinař, T.; Alföldi, J.; Deng, J.; Dugan, S.; van Elk, C. E.; Hunter, M. E.; Joshi, V. et al.; Khan, Z.; Kovar, C.; Lee, S. L.; Lindblad-Toh, K.; Mancia, A.; Nielsen, R.; Qin, X.; Qu, J.; Raney, B. J.; Vijay, N.; Wolf, J. B. W.; Hahn, M. W.; Muzny, D. M.; Worley, K. C.; Gilbert, M. T. P.; Gibbs, R. A.: Convergent evolution of the genomes of marine mammals. Nature Genetics 47 (3), pp. 272 - 275 (2015)

MPG.PuRe

DOI

47.

Journal Article

Jeglinski, J. W. E.; Wolf, J. B. W.; Werner, C.; Costa, D. P.; Trillmich, F.: Differences in foraging ecology align with genetically divergent ecotypes of a highly mobile marine top predator. Oecologia 179 (4), pp. 1041 - 1052 (2015)

MPG.PuRe

DOI

48.

Journal Article

Lopes, F.; Hoffman, J. I.; Valiati, V. H.; Bonatto, S. L.; Wolf, J. B. W.; Trillmich, F.; Oliveira, L. R.: Fine-scale matrilineal population structure in the Galapagos fur seal and its implications for conservation management. Conservation Genetics 16 (5), pp. 1099 - 1113 (2015)

MPG.PuRe

DOI

49.

Journal Article

Poelstra, J. W.; Vijay, N.; Hoeppner, M. P.; Wolf, J. B. W.: Transcriptomics of colour patterning and coloration shifts in crows. Molecular Ecology 24 (18), pp. 4617 - 4628 (2015)

MPG.PuRe

DOI

50.

Journal Article

Shafer, A. B. A.; Gattepaille, L. M.; Stewart, R. E. A.; Wolf, J. B. W.: Demographic inferences using short-read genomic data in an approximate Bayesian computation framework: In silico evaluation of power, biases and proof of concept in Atlantic walrus. Molecular Ecology 24 (2), pp. 328 - 345 (2015)

MPG.PuRe

DOI

Publications of Jochen B. W. Wolf

Journal Article (90)